Sobic.010G047400.1

Description : Ubiquitin-associated/translation elongation factor EF1B protein

Gene families : OG_01_0019372 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0019372_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G047400.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G047400.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_17
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_46

Type	GO Term	Name	Evidence	Source
CC	GO:0000813	ESCRT I complex	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
MF	GO:0032182	ubiquitin-like protein binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0036452	ESCRT complex	None	Extended
MF	GO:0043130	ubiquitin binding	ISM	GOs from InterProScan
BP	GO:0043162	ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	ISM	GOs from InterProScan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR042575	UBAP1_C	Gene3D	158	230
IPR038870	UBAP1	PANTHER	16	227

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.010G047400.1

Expression Profile

Co-expression Networks

Functional Annotation