Sobic.010G055700.1

Description : Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain

Gene families : OG_01_0002881 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002881_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G055700.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G055700.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_195
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_232

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0032977	membrane insertase activity	ISM	GOs from InterProScan
MF	GO:0140104	molecular carrier activity	None	Extended
MF	GO:0140597	protein carrier chaperone	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001708	YidC/ALB3/OXA1/COX18	PANTHER	16	587
IPR019734	TPR_repeat	SMART	465	498
IPR019734	TPR_repeat	SMART	431	464
IPR019734	TPR_repeat	SMART	503	536
IPR019734	TPR_repeat	SMART	545	578
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	430	577
IPR019734	TPR_repeat	Pfam	550	578
IPR011990	TPR-like_helical_dom_sf	Gene3D	415	589

No CAZYmes available for this sequence

External Links

No external refs found!