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  5. Sobic.010G089900.1

Sobic.010G089900.1


Description : DNAse I-like superfamily protein


Gene families : OG_01_0063844 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0063844_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G089900.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G089900.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_195
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_155


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004445 inositol-polyphosphate 5-phosphatase activity ISM GOs from InterProScan
MF GO:0016791 phosphatase activity ISM GOs from InterProScan
BP GO:0046855 obsolete inositol phosphate dephosphorylation ISM GOs from InterProScan
BP GO:0046856 phosphatidylinositol dephosphorylation ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045849 IP5P_plant PANTHER 1 510
IPR005135 Endo/exonuclease/phosphatase Pfam 47 475
IPR036691 Endo/exonu/phosph_ase_sf SUPERFAMILY 37 501
IPR036691 Endo/exonu/phosph_ase_sf Gene3D 136 509
IPR036691 Endo/exonu/phosph_ase_sf Gene3D 24 125
IPR000300 IPPc SMART 161 490

No CAZYmes available for this sequence

No external refs found!