Sobic.010G106900.1

Description : ketose-bisphosphate aldolase class-II family protein

Gene families : OG_01_0001818 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001818_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G106900.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G106900.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_74
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_37

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0016491	oxidoreductase activity	ISM	GOs from InterProScan
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016832	aldehyde-lyase activity	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0050661	NADP binding	ISM	GOs from InterProScan
MF	GO:0051287	NAD binding	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013785	Aldolase_TIM	Gene3D	1099	1379
IPR008927	6-PGluconate_DH-like_C_sf	SUPERFAMILY	178	285
IPR013328	6PGD_dom2	Gene3D	175	295
IPR006115	6PGDH_NADP-bd	Pfam	328	486
IPR037051	4-carb_acid_sugar_kinase_N_sf	Gene3D	660	899
IPR000771	FBA_II	Pfam	1103	1378
IPR000771	FBA_II	CDD	1104	1377
IPR013328	6PGD_dom2	Gene3D	490	622
IPR000771	FBA_II	TIGRFAM	1103	1379
IPR036291	NAD(P)-bd_dom_sf	SUPERFAMILY	8	167
IPR002204	3-OH-isobutyrate_DH-rel_CS	ProSitePatterns	331	344
IPR029154	HIBADH-like_NADP-bd	Pfam	179	283
IPR029154	HIBADH-like_NADP-bd	Pfam	493	613
IPR042213	NBD_C_sf	Gene3D	914	1095
IPR010737	4-carb_acid_sugar_kinase_N	Pfam	661	898
IPR008927	6-PGluconate_DH-like_C_sf	SUPERFAMILY	492	621
IPR031475	NBD_C	Pfam	923	1089
IPR036291	NAD(P)-bd_dom_sf	SUPERFAMILY	327	486

No CAZYmes available for this sequence

External Links

No external refs found!