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  5. Sobic.010G107000.1

Sobic.010G107000.1


Description : FORMS APLOID AND BINUCLEATE CELLS 1C


Gene families : OG_01_0003232 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003232_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G107000.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G107000.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_280


Type GO Term Name Evidence Source
MF GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
MF GO:0016307 obsolete phosphatidylinositol phosphate kinase activity ISM GOs from InterProScan
MF GO:0016887 ATP hydrolysis activity ISM GOs from InterProScan
BP GO:0046488 phosphatidylinositol metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002423 Cpn60/GroEL/TCP-1 Pfam 288 549
IPR027484 PInositol-4-P-5-kinase_N Gene3D 1284 1443
IPR027409 GroEL-like_apical_dom_sf Gene3D 329 500
IPR002498 PInositol-4-P-4/5-kinase_core Pfam 1362 1528
IPR044769 PIKfyve_PIPKc CDD 1323 1586
IPR002498 PInositol-4-P-4/5-kinase_core ProSiteProfiles 1267 1586
IPR027409 GroEL-like_apical_dom_sf SUPERFAMILY 330 500
IPR027410 TCP-1-like_intermed_sf SUPERFAMILY 285 521
IPR002498 PInositol-4-P-4/5-kinase_core SMART 1298 1587

No CAZYmes available for this sequence

No external refs found!