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  5. Sobic.010G128800.1

Sobic.010G128800.1


Description : Eukaryotic aspartyl protease family protein


Gene families : OG_01_0000271 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000271_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G128800.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G128800.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_41
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_118


Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity ISM GOs from InterProScan
BP GO:0006508 proteolysis ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001969 Aspartic_peptidase_AS ProSitePatterns 137 148
IPR021109 Peptidase_aspartic_dom_sf Gene3D 303 469
IPR033121 PEPTIDASE_A1 ProSiteProfiles 122 465
IPR001461 Aspartic_peptidase_A1 PANTHER 8 469
IPR032861 TAXi_N Pfam 122 297
IPR021109 Peptidase_aspartic_dom_sf Gene3D 106 297
IPR032799 TAXi_C Pfam 322 465
IPR021109 Peptidase_aspartic_dom_sf SUPERFAMILY 118 469

No CAZYmes available for this sequence

No external refs found!