Sobic.010G145800.1

Description : RNA-binding KH domain-containing protein

Gene families : OG_01_0011740 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011740_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G145800.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G145800.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_62
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_166

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR004088	KH_dom_type_1	Pfam	592	655
IPR004088	KH_dom_type_1	Pfam	192	261
IPR004088	KH_dom_type_1	Pfam	428	493
IPR036612	KH_dom_type_1_sf	SUPERFAMILY	421	507
IPR036612	KH_dom_type_1_sf	SUPERFAMILY	583	660
IPR004087	KH_dom	SMART	341	414
IPR004087	KH_dom	SMART	189	265
IPR004087	KH_dom	SMART	425	499
IPR004087	KH_dom	SMART	589	659
IPR036612	KH_dom_type_1_sf	SUPERFAMILY	185	269
IPR036612	KH_dom_type_1_sf	Gene3D	589	660

No CAZYmes available for this sequence

External Links

No external refs found!