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  5. Sobic.010G147833.1

Sobic.010G147833.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0005972 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005972_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G147833.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G147833.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_185
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_116


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 9 241
IPR016024 ARM-type_fold SUPERFAMILY 933 1272
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 26 654
IPR001680 WD40_rpt ProSiteProfiles 531 553
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 451 770
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 3 258
IPR001680 WD40_rpt SMART 5 42
IPR001680 WD40_rpt SMART 595 642
IPR001680 WD40_rpt SMART 1322 1357
IPR001680 WD40_rpt SMART 51 90
IPR001680 WD40_rpt SMART 496 544

No CAZYmes available for this sequence

No external refs found!