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  5. Sobic.010G160300.1

Sobic.010G160300.1


Description : CTC-interacting domain 11


Gene families : OG_01_0000927 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000927_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G160300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G160300.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_221
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_161


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR035979 RBD_domain_sf SUPERFAMILY 268 358
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 261 359
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 134 255
IPR000504 RRM_dom ProSiteProfiles 179 254
IPR035979 RBD_domain_sf SUPERFAMILY 129 251
IPR009818 Ataxin-2_C Pfam 58 73
IPR000504 RRM_dom SMART 277 348
IPR000504 RRM_dom SMART 180 250
IPR000504 RRM_dom Pfam 278 341
IPR000504 RRM_dom Pfam 181 243
IPR034823 CID8-like_RRM1 CDD 177 256
IPR000504 RRM_dom ProSiteProfiles 276 352

No CAZYmes available for this sequence

No external refs found!