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  5. Sobic.010G172800.1

Sobic.010G172800.1


Description : basic helix-loop-helix (bHLH) DNA-binding family protein


Gene families : OG_01_0021526 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0021526_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G172800.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G172800.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_69
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_57


Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036638 HLH_DNA-bd_sf Gene3D 358 429
IPR011598 bHLH_dom ProSiteProfiles 360 409
IPR011598 bHLH_dom SMART 366 415
IPR036638 HLH_DNA-bd_sf SUPERFAMILY 362 431
IPR044658 bHLH92/bHLH041-like PANTHER 19 553
IPR011598 bHLH_dom Pfam 367 409

No CAZYmes available for this sequence

No external refs found!