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  5. Sobic.010G176800.1

Sobic.010G176800.1


Description : ABC2 homolog 2


Gene families : OG_01_0000078 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000078_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G176800.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G176800.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_312
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_100


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
MF GO:0140359 ABC-type transporter activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR027417 P-loop_NTPase Gene3D 617 896
IPR003593 AAA+_ATPase SMART 662 847
IPR003439 ABC_transporter-like_ATP-bd ProSiteProfiles 632 869
IPR003439 ABC_transporter-like_ATP-bd Pfam 654 798
IPR027417 P-loop_NTPase SUPERFAMILY 633 863
IPR017871 ABC_transporter-like_CS ProSitePatterns 771 785
IPR026082 ABCA PANTHER 14 949

No CAZYmes available for this sequence

No external refs found!