Sobic.010G178500.1

Description : multiprotein bridging factor 1C

Gene families : OG_01_0016086 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016086_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G178500.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G178500.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_276
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_2

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001387	Cro/C1-type_HTH	Pfam	90	141
IPR013729	MBF1_N	Pfam	12	82
IPR001387	Cro/C1-type_HTH	SMART	89	144
IPR001387	Cro/C1-type_HTH	CDD	89	141
IPR010982	Lambda_DNA-bd_dom_sf	Gene3D	74	155
IPR001387	Cro/C1-type_HTH	ProSiteProfiles	90	144
IPR010982	Lambda_DNA-bd_dom_sf	SUPERFAMILY	86	141

No CAZYmes available for this sequence

External Links

No external refs found!