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  5. Sobic.010G180800.2

Sobic.010G180800.2


Description : Stabilizer of iron transporter SufD / Polynucleotidyl transferase


Gene families : OG_01_0000015 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000015_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G180800.2
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G180800.2
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_320
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_186


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036397 RNaseH_sf Gene3D 692 981
IPR003100 PAZ_dom SMART 339 471
IPR032472 ArgoL2 Pfam 477 521
IPR003100 PAZ_dom Pfam 340 465
IPR014811 ArgoL1 Pfam 283 333
IPR045246 Piwi_ago-like CDD 493 943
IPR032474 Argonaute_N Pfam 139 273
IPR003165 Piwi Pfam 624 943
IPR032473 Argonaute_Mid_dom Pfam 532 609
IPR003100 PAZ_dom ProSiteProfiles 335 449
IPR012337 RNaseH-like_sf SUPERFAMILY 612 944
IPR003165 Piwi ProSiteProfiles 623 944
IPR014811 ArgoL1 SMART 282 334
IPR036085 PAZ_dom_sf SUPERFAMILY 142 475
IPR003165 Piwi SMART 623 944

No CAZYmes available for this sequence

No external refs found!