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  5. Sobic.010G188900.1

Sobic.010G188900.1


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0006176 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006176_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G188900.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G188900.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_4
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_134


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 271 305
IPR002885 Pentatricopeptide_rpt TIGRFAM 273 306
IPR002885 Pentatricopeptide_rpt TIGRFAM 460 488
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 457 491
IPR002885 Pentatricopeptide_rpt Pfam 270 317
IPR011990 TPR-like_helical_dom_sf Gene3D 425 542
IPR011990 TPR-like_helical_dom_sf Gene3D 331 424
IPR011990 TPR-like_helical_dom_sf Gene3D 185 330
IPR002885 Pentatricopeptide_rpt Pfam 453 485

No CAZYmes available for this sequence

No external refs found!