Sobic.010G224300.1

Description : cyclophilin 59

Gene families : OG_01_0009432 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009432_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G224300.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G224300.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_157
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_171

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016859	cis-trans isomerase activity	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018208	peptidyl-proline modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR029000	Cyclophilin-like_dom_sf	SUPERFAMILY	1	180
IPR000504	RRM_dom	SMART	243	316
IPR002130	Cyclophilin-type_PPIase_dom	PRINTS	16	31
IPR002130	Cyclophilin-type_PPIase_dom	PRINTS	92	107
IPR002130	Cyclophilin-type_PPIase_dom	PRINTS	42	54
IPR002130	Cyclophilin-type_PPIase_dom	PRINTS	121	136
IPR035542	CRIP	PANTHER	1	486
IPR002130	Cyclophilin-type_PPIase_dom	Pfam	4	160
IPR000504	RRM_dom	ProSiteProfiles	242	320
IPR035538	Cyclophilin_PPIL4	CDD	4	169
IPR001878	Znf_CCHC	Pfam	339	355
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	182	324
IPR000504	RRM_dom	Pfam	244	314
IPR036875	Znf_CCHC_sf	SUPERFAMILY	329	361
IPR001878	Znf_CCHC	SMART	339	355
IPR001878	Znf_CCHC	ProSiteProfiles	340	355
IPR002130	Cyclophilin-type_PPIase_dom	ProSiteProfiles	7	161
IPR029000	Cyclophilin-like_dom_sf	Gene3D	1	172
IPR035979	RBD_domain_sf	SUPERFAMILY	228	333

No CAZYmes available for this sequence

External Links

No external refs found!