1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.010G225300.2

Sobic.010G225300.2


Description : ubiquitin 4


Gene families : OG_01_0000003 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000003_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G225300.2
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G225300.2
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_273
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_86


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR029071 Ubiquitin-like_domsf SUPERFAMILY 196 272
IPR000626 Ubiquitin-like_dom Pfam 199 270
IPR000626 Ubiquitin-like_dom Pfam 47 118
IPR000626 Ubiquitin-like_dom Pfam 123 194
IPR019954 Ubiquitin_CS ProSitePatterns 223 248
IPR029071 Ubiquitin-like_domsf SUPERFAMILY 120 196
IPR000626 Ubiquitin-like_dom ProSiteProfiles 197 272
IPR019954 Ubiquitin_CS ProSitePatterns 147 172
IPR029071 Ubiquitin-like_domsf SUPERFAMILY 44 120
IPR000626 Ubiquitin-like_dom SMART 197 268
IPR000626 Ubiquitin-like_dom SMART 45 116
IPR000626 Ubiquitin-like_dom SMART 121 192
IPR000626 Ubiquitin-like_dom ProSiteProfiles 121 196
IPR019956 Ubiquitin_dom PRINTS 55 75
IPR019956 Ubiquitin_dom PRINTS 76 96
IPR019956 Ubiquitin_dom PRINTS 97 118
IPR000626 Ubiquitin-like_dom ProSiteProfiles 45 120
IPR019954 Ubiquitin_CS ProSitePatterns 71 96

No CAZYmes available for this sequence

No external refs found!