1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.010G233500.1

Sobic.010G233500.1


Description : Cysteine proteinases superfamily protein


Gene families : OG_01_0060808 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0060808_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G233500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G233500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_155
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_48


Type GO Term Name Evidence Source
BP GO:0006508 proteolysis ISM GOs from InterProScan
MF GO:0008234 cysteine-type peptidase activity ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013201 Prot_inhib_I29 SMART 48 104
IPR000668 Peptidase_C1A_C Pfam 153 363
IPR013201 Prot_inhib_I29 Pfam 48 104
IPR039417 Peptidase_C1A_papain-like CDD 153 363
IPR025661 Pept_asp_AS ProSitePatterns 324 343
IPR000668 Peptidase_C1A_C SMART 152 364
IPR038765 Papain-like_cys_pep_sf SUPERFAMILY 40 364
IPR000668 Peptidase_C1A_C PRINTS 309 319
IPR000668 Peptidase_C1A_C PRINTS 324 330
IPR000668 Peptidase_C1A_C PRINTS 170 185

No CAZYmes available for this sequence

No external refs found!