Sobic.010G238700.1

Description : EPS15 homology domain 1

Gene families : OG_01_0000547 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000547_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G238700.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G238700.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_299
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_168

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	ISM	GOs from InterProScan
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR027417	P-loop_NTPase	Gene3D	199	427
IPR000261	EH_dom	SMART	8	96
IPR000261	EH_dom	CDD	19	85
IPR002048	EF_hand_dom	SMART	52	80
IPR002048	EF_hand_dom	SMART	18	46
IPR040990	DUF5600	Pfam	434	535
IPR011992	EF-hand-dom_pair	SUPERFAMILY	11	86
IPR031692	EHD_N	Pfam	162	194
IPR030381	G_DYNAMIN_dom	ProSiteProfiles	193	429
IPR002048	EF_hand_dom	ProSiteProfiles	14	49
IPR000261	EH_dom	ProSiteProfiles	15	94
IPR000261	EH_dom	Pfam	18	80
IPR027417	P-loop_NTPase	SUPERFAMILY	189	466
IPR045063	Dynamin_N	Pfam	199	358

No CAZYmes available for this sequence

External Links

No external refs found!