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Description : polyubiquitin 10
Gene families : OG_01_0000003 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000003_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G239500.6 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G239500.6 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_155 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_122 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR000626 | Ubiquitin-like_dom | Pfam | 77 | 148 |
| IPR000626 | Ubiquitin-like_dom | Pfam | 229 | 300 |
| IPR000626 | Ubiquitin-like_dom | Pfam | 381 | 452 |
| IPR000626 | Ubiquitin-like_dom | Pfam | 305 | 376 |
| IPR000626 | Ubiquitin-like_dom | Pfam | 153 | 224 |
| IPR000626 | Ubiquitin-like_dom | SMART | 151 | 222 |
| IPR000626 | Ubiquitin-like_dom | SMART | 227 | 298 |
| IPR000626 | Ubiquitin-like_dom | SMART | 303 | 374 |
| IPR000626 | Ubiquitin-like_dom | SMART | 379 | 450 |
| IPR000626 | Ubiquitin-like_dom | SMART | 75 | 146 |
| IPR029071 | Ubiquitin-like_domsf | SUPERFAMILY | 302 | 378 |
| IPR019956 | Ubiquitin_dom | PRINTS | 85 | 105 |
| IPR019956 | Ubiquitin_dom | PRINTS | 127 | 148 |
| IPR019956 | Ubiquitin_dom | PRINTS | 106 | 126 |
| IPR029071 | Ubiquitin-like_domsf | SUPERFAMILY | 150 | 226 |
| IPR019954 | Ubiquitin_CS | ProSitePatterns | 177 | 202 |
| IPR019954 | Ubiquitin_CS | ProSitePatterns | 405 | 430 |
| IPR000626 | Ubiquitin-like_dom | ProSiteProfiles | 379 | 454 |
| IPR000626 | Ubiquitin-like_dom | ProSiteProfiles | 303 | 378 |
| IPR000626 | Ubiquitin-like_dom | ProSiteProfiles | 151 | 226 |
| IPR019954 | Ubiquitin_CS | ProSitePatterns | 253 | 278 |
| IPR000626 | Ubiquitin-like_dom | ProSiteProfiles | 227 | 302 |
| IPR000626 | Ubiquitin-like_dom | ProSiteProfiles | 75 | 150 |
| IPR029071 | Ubiquitin-like_domsf | SUPERFAMILY | 226 | 302 |
| IPR029071 | Ubiquitin-like_domsf | SUPERFAMILY | 72 | 150 |
| IPR019954 | Ubiquitin_CS | ProSitePatterns | 101 | 126 |
| IPR019954 | Ubiquitin_CS | ProSitePatterns | 329 | 354 |
| IPR029071 | Ubiquitin-like_domsf | SUPERFAMILY | 377 | 454 |
No CAZYmes available for this sequence
| No external refs found! |