Sobic.010G246500.1

Description : Xyloglucan endotransglucosylase/hydrolase family protein

Gene families : OG_01_0012339 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012339_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G246500.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G246500.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_55

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	obsolete cellular glucan metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
BP	GO:0010411	xyloglucan metabolic process	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	ISM	GOs from InterProScan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0042546	cell wall biogenesis	ISM	GOs from InterProScan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	ISM	GOs from InterProScan
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR016455	XTH	PIRSF	6	312
IPR016455	XTH	CDD	32	308
IPR000757	GH16	Pfam	37	216
IPR008263	GH16_AS	ProSitePatterns	110	120
IPR008264	Beta_glucanase	PRINTS	164	181
IPR008264	Beta_glucanase	PRINTS	68	86
IPR008264	Beta_glucanase	PRINTS	144	161
IPR008264	Beta_glucanase	PRINTS	126	139
IPR044791	Beta-glucanase/XTH	PANTHER	33	308
IPR000757	GH16	ProSiteProfiles	30	224
IPR013320	ConA-like_dom_sf	SUPERFAMILY	36	311
IPR010713	XET_C	Pfam	266	308

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.010G246500.1

Expression Profile

Co-expression Networks

Functional Annotation