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  5. Sobic.010G246700.1

Sobic.010G246700.1


Description : xyloglucan endotransglucosylase/hydrolase 25


Gene families : OG_01_0000345 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000345_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G246700.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G246700.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_83
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_33


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
CC GO:0005618 cell wall ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
BP GO:0006073 obsolete cellular glucan metabolic process ISM GOs from InterProScan
BP GO:0010411 xyloglucan metabolic process ISM GOs from InterProScan
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity ISM GOs from InterProScan
BP GO:0042546 cell wall biogenesis ISM GOs from InterProScan
CC GO:0048046 apoplast ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000757 GH16 ProSiteProfiles 23 217
IPR013320 ConA-like_dom_sf SUPERFAMILY 28 300
IPR016455 XTH CDD 28 298
IPR016455 XTH PIRSF 1 301
IPR044791 Beta-glucanase/XTH PANTHER 21 300
IPR000757 GH16 Pfam 30 209
IPR008263 GH16_AS ProSitePatterns 103 113
IPR010713 XET_C Pfam 254 298

No CAZYmes available for this sequence

No external refs found!