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  5. Sobic.010G255800.2

Sobic.010G255800.2


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0011407 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011407_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G255800.2
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G255800.2
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_71
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_51


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 104 219
IPR002885 Pentatricopeptide_rpt Pfam 275 304
IPR002885 Pentatricopeptide_rpt Pfam 451 474
IPR011990 TPR-like_helical_dom_sf Gene3D 529 659
IPR002885 Pentatricopeptide_rpt Pfam 477 524
IPR011990 TPR-like_helical_dom_sf Gene3D 324 425
IPR011990 TPR-like_helical_dom_sf Gene3D 431 528
IPR011990 TPR-like_helical_dom_sf Gene3D 220 323
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 478 512
IPR002885 Pentatricopeptide_rpt TIGRFAM 480 513
IPR002885 Pentatricopeptide_rpt TIGRFAM 275 301
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 273 307

No CAZYmes available for this sequence

No external refs found!