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  5. Sobic.010G260100.1

Sobic.010G260100.1


Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein


Gene families : OG_01_0001554 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001554_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G260100.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G260100.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_4
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_41


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISM GOs from InterProScan
MF GO:0003735 structural constituent of ribosome ISM GOs from InterProScan
CC GO:0022625 cytosolic large ribosomal subunit ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR039109 Ribosomal_eL30-like PANTHER 1 112
IPR000231 Ribosomal_eL30 PANTHER 1 112
IPR022991 Ribosomal_eL30_CS ProSitePatterns 24 48
IPR022991 Ribosomal_eL30_CS ProSitePatterns 80 100
IPR029064 Ribosomal_eL30-like_sf Gene3D 2 108
IPR000231 Ribosomal_eL30 Hamap 12 109
IPR004038 Ribosomal_eL8/eL30/eS12/Gad45 Pfam 12 105
IPR029064 Ribosomal_eL30-like_sf SUPERFAMILY 12 106

No CAZYmes available for this sequence

No external refs found!