Sobic.010G273800.2

Description : starch branching enzyme 2.2

Gene families : OG_01_0008114 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008114_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G273800.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G273800.2
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_23
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_186

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0003844	1,4-alpha-glucan branching enzyme activity	ISM	GOs from InterProScan
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005977	glycogen metabolic process	None	Extended
BP	GO:0005978	glycogen biosynthetic process	ISM	GOs from InterProScan
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006112	energy reserve metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015980	energy derivation by oxidation of organic compounds	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	ISM	GOs from InterProScan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006047	Glyco_hydro_13_cat_dom	Pfam	299	374
IPR013783	Ig-like_fold	Gene3D	125	238
IPR006047	Glyco_hydro_13_cat_dom	SMART	274	634
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	240	652
IPR014756	Ig_E-set	SUPERFAMILY	123	233
IPR037439	Branching_enzy	PIRSF	23	774
IPR006048	A-amylase/branching_C	Pfam	663	763
IPR004193	Glyco_hydro_13_N	Pfam	129	211
IPR013780	Glyco_hydro_b	Gene3D	657	773
IPR037439	Branching_enzy	PANTHER	28	780

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
CBM48	76	833	1.1e-09	129	217

External Links

No external refs found!

Sobic.010G273800.2

Expression Profile

Co-expression Networks

Functional Annotation