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  5. Sobic.010G276100.1

Sobic.010G276100.1


Description : tonoplast monosaccharide transporter3


Gene families : OG_01_0017766 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017766_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.010G276100.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.010G276100.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_5
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_131


Type GO Term Name Evidence Source
CC GO:0016020 membrane ISM GOs from InterProScan
MF GO:0022857 transmembrane transporter activity ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036259 MFS_trans_sf Gene3D 508 751
IPR036259 MFS_trans_sf Gene3D 2 253
IPR005829 Sugar_transporter_CS ProSitePatterns 605 621
IPR036259 MFS_trans_sf SUPERFAMILY 8 743
IPR003663 Sugar/inositol_transpt PRINTS 650 671
IPR003663 Sugar/inositol_transpt PRINTS 100 119
IPR003663 Sugar/inositol_transpt PRINTS 673 685
IPR003663 Sugar/inositol_transpt PRINTS 15 25
IPR005828 MFS_sugar_transport-like Pfam 7 223
IPR005828 MFS_sugar_transport-like Pfam 526 745
IPR020846 MFS_dom ProSiteProfiles 7 738
IPR005829 Sugar_transporter_CS ProSitePatterns 105 130
IPR005829 Sugar_transporter_CS ProSitePatterns 63 80

No CAZYmes available for this sequence

No external refs found!