Sobic.K043400.1

Description : homolog of mamallian P58IPK

Gene families : OG_01_0006473 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006473_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.K043400.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.K043400.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_60
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_205

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001623	DnaJ_domain	CDD	358	413
IPR036869	J_dom_sf	SUPERFAMILY	352	460
IPR013105	TPR_2	Pfam	187	219
IPR019734	TPR_repeat	ProSiteProfiles	186	219
IPR001623	DnaJ_domain	Pfam	358	421
IPR036869	J_dom_sf	Gene3D	356	462
IPR019734	TPR_repeat	ProSiteProfiles	71	104
IPR001623	DnaJ_domain	PRINTS	378	393
IPR001623	DnaJ_domain	PRINTS	360	378
IPR001623	DnaJ_domain	PRINTS	396	416
IPR001623	DnaJ_domain	PRINTS	416	435
IPR044620	P58IPK-like	PANTHER	19	470
IPR019734	TPR_repeat	Pfam	278	301
IPR001623	DnaJ_domain	ProSiteProfiles	358	424
IPR019734	TPR_repeat	SMART	37	70
IPR019734	TPR_repeat	SMART	304	337
IPR019734	TPR_repeat	SMART	186	219
IPR019734	TPR_repeat	SMART	71	104
IPR019734	TPR_repeat	SMART	270	303
IPR018253	DnaJ_domain_CS	ProSitePatterns	401	420
IPR011990	TPR-like_helical_dom_sf	Gene3D	28	355
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	38	353
IPR001623	DnaJ_domain	SMART	357	416

No CAZYmes available for this sequence

External Links

No external refs found!