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  5. Sevir.9G087500.1

Sevir.9G087500.1


Description : senescence-associated gene 12


Gene families : OG_01_0004346 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004346_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G087500.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G087500.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_131
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_9


Type GO Term Name Evidence Source
BP GO:0006508 proteolysis ISM GOs from InterProScan
MF GO:0008234 cysteine-type peptidase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000668 Peptidase_C1A_C Pfam 135 349
IPR013201 Prot_inhib_I29 Pfam 44 101
IPR013201 Prot_inhib_I29 SMART 44 101
IPR039417 Peptidase_C1A_papain-like CDD 135 349
IPR000668 Peptidase_C1A_C PRINTS 295 305
IPR000668 Peptidase_C1A_C PRINTS 311 317
IPR000668 Peptidase_C1A_C PRINTS 152 167
IPR025660 Pept_his_AS ProSitePatterns 293 303
IPR000169 Pept_cys_AS ProSitePatterns 152 163
IPR038765 Papain-like_cys_pep_sf SUPERFAMILY 40 339
IPR025661 Pept_asp_AS ProSitePatterns 311 330
IPR000668 Peptidase_C1A_C SMART 134 350

No CAZYmes available for this sequence

No external refs found!