1. Home
  2. Species
  3. Setaria viridis
  4. Sequence
  5. Sevir.9G090100.2

Sevir.9G090100.2


Description : Glycosyl hydrolase family protein


Gene families : OG_01_0000228 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000228_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G090100.2
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G090100.2
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_9
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_36


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002772 Glyco_hydro_3_C Pfam 409 617
IPR036962 Glyco_hydro_3_N_sf Gene3D 19 393
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 24 408
IPR036881 Glyco_hydro_3_C_sf SUPERFAMILY 409 617
IPR001764 Glyco_hydro_3_N Pfam 45 372
IPR001764 Glyco_hydro_3_N PRINTS 221 237
IPR001764 Glyco_hydro_3_N PRINTS 291 309
IPR001764 Glyco_hydro_3_N PRINTS 176 192
IPR001764 Glyco_hydro_3_N PRINTS 130 149
IPR001764 Glyco_hydro_3_N PRINTS 106 122
IPR036881 Glyco_hydro_3_C_sf Gene3D 394 620
HMM Family HMM Length Query Length e-Value Query Start Query End
GH3 216 623 1e-75 103 337
No external refs found!