Sevir.9G093300.1

Description : Transducin/WD40 repeat-like superfamily protein

Gene families : OG_01_0004614 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004614_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G093300.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G093300.1	No neighbors in network
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_7

Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0036265	RNA (guanine-N7)-methylation	ISM	GOs from InterProScan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036322	WD40_repeat_dom_sf	SUPERFAMILY	22	247
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	20	104
IPR001680	WD40_rpt	ProSiteProfiles	198	233
IPR028884	Trm82	PANTHER	20	431
IPR001680	WD40_rpt	ProSiteProfiles	58	99
IPR036322	WD40_repeat_dom_sf	SUPERFAMILY	199	334
IPR001680	WD40_rpt	Pfam	59	90
IPR001680	WD40_rpt	Pfam	146	180
IPR001680	WD40_rpt	Pfam	198	233
IPR028884	Trm82	Hamap	28	425
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	105	353
IPR001680	WD40_rpt	SMART	93	129
IPR001680	WD40_rpt	SMART	190	233
IPR001680	WD40_rpt	SMART	49	90
IPR001680	WD40_rpt	SMART	143	182

No CAZYmes available for this sequence

External Links

No external refs found!