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  5. Sevir.1G301000.1

Sevir.1G301000.1


Description : xylem cysteine peptidase 1


Gene families : OG_01_0003287 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003287_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G301000.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_14


Type GO Term Name Evidence Source
BP GO:0006508 proteolysis ISM GOs from InterProScan
MF GO:0008234 cysteine-type peptidase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR038765 Papain-like_cys_pep_sf SUPERFAMILY 41 349
IPR000169 Pept_cys_AS ProSitePatterns 151 162
IPR000668 Peptidase_C1A_C PRINTS 151 166
IPR000668 Peptidase_C1A_C PRINTS 293 303
IPR013201 Prot_inhib_I29 Pfam 45 101
IPR039417 Peptidase_C1A_papain-like CDD 137 347
IPR000668 Peptidase_C1A_C Pfam 133 348
IPR025661 Pept_asp_AS ProSitePatterns 308 327
IPR000668 Peptidase_C1A_C SMART 133 348
IPR025660 Pept_his_AS ProSitePatterns 291 301
IPR013201 Prot_inhib_I29 SMART 45 101

No CAZYmes available for this sequence

No external refs found!