Sevir.9G107200.1

Description : KNOTTED-like from Arabidopsis thaliana

Gene families : OG_01_0013099 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013099_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G107200.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G107200.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_168
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_75

Type	GO Term	Name	Evidence	Source
MF	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0003700	DNA-binding transcription factor activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	GOs from InterProScan
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005541	KNOX2	Pfam	129	172
IPR005539	ELK_dom	Pfam	222	243
IPR017970	Homeobox_CS	ProSitePatterns	280	303
IPR008422	Homeobox_KN_domain	Pfam	262	301
IPR009057	Homeobox-like_sf	SUPERFAMILY	244	319
IPR001356	Homeobox_dom	ProSiteProfiles	242	305
IPR005540	KNOX1	Pfam	73	113
IPR005540	KNOX1	SMART	71	115
IPR005539	ELK_dom	ProSiteProfiles	222	242
IPR005541	KNOX2	SMART	123	174
IPR005539	ELK_dom	SMART	222	243
IPR001356	Homeobox_dom	CDD	254	306
IPR001356	Homeobox_dom	SMART	244	309

No CAZYmes available for this sequence

External Links

No external refs found!

Sevir.9G107200.1

Expression Profile

Co-expression Networks

Functional Annotation