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  5. Sevir.9G111100.1

Sevir.9G111100.1


Description : DNA-binding family protein


Gene families : OG_01_0001876 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001876_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G111100.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G111100.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_205
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_2


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR032451 SMARCC_C Pfam 803 879
IPR009057 Homeobox-like_sf SUPERFAMILY 139 221
IPR001005 SANT/Myb CDD 376 400
IPR007526 SWIRM Pfam 135 220
IPR009057 Homeobox-like_sf SUPERFAMILY 355 409
IPR017930 Myb_dom Pfam 358 400
IPR001005 SANT/Myb ProSiteProfiles 358 401
IPR017930 Myb_dom ProSiteProfiles 358 405
IPR001005 SANT/Myb SMART 355 403
IPR000433 Znf_ZZ SMART 296 340
IPR043145 Znf_ZZ_sf Gene3D 292 345
IPR017884 SANT_dom ProSiteProfiles 354 405
IPR007526 SWIRM ProSiteProfiles 132 229
IPR000433 Znf_ZZ ProSiteProfiles 296 342
IPR000433 Znf_ZZ ProSitePatterns 302 328
IPR036388 WH-like_DNA-bd_sf Gene3D 138 223
IPR000433 Znf_ZZ Pfam 299 335
IPR041984 Rsc8/Ssr1/Ssr2_ZZ CDD 300 344

No CAZYmes available for this sequence

No external refs found!