Sevir.1G302300.1

Description : tetratricopeptide repeat (TPR)-containing protein

Gene families : OG_01_0001632 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001632_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G302300.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G302300.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_167
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_74

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006996	organelle organization	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR028275	CLU_N	Pfam	101	178
IPR033646	CLU-central	Pfam	782	962
IPR025697	CLU_dom	Pfam	381	654
IPR023231	GSKIP_dom_sf	Gene3D	233	334
IPR023231	GSKIP_dom_sf	SUPERFAMILY	219	338
IPR011990	TPR-like_helical_dom_sf	Gene3D	980	1249
IPR033646	CLU-central	CDD	784	962
IPR025697	CLU_dom	ProSiteProfiles	354	655
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	1109	1187
IPR027523	CLU_prot	PANTHER	68	1295
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	989	1101
IPR027523	CLU_prot	Hamap	40	1331

No CAZYmes available for this sequence

External Links

No external refs found!