1. Home
  2. Species
  3. Setaria viridis
  4. Sequence
  5. Sevir.9G127500.1

Sevir.9G127500.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0019917 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0019917_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G127500.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_83


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR020472 G-protein_beta_WD-40_rep PRINTS 178 192
IPR020472 G-protein_beta_WD-40_rep PRINTS 135 149
IPR020472 G-protein_beta_WD-40_rep PRINTS 391 405
IPR001680 WD40_rpt ProSiteProfiles 371 413
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 49 201
IPR001680 WD40_rpt ProSiteProfiles 116 157
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 75 439
IPR001680 WD40_rpt ProSiteProfiles 158 193
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 212 334
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 335 461
IPR001680 WD40_rpt Pfam 370 404
IPR001680 WD40_rpt Pfam 322 359
IPR001680 WD40_rpt Pfam 117 148
IPR001680 WD40_rpt Pfam 234 262
IPR001680 WD40_rpt Pfam 278 313
IPR001680 WD40_rpt Pfam 152 191
IPR019775 WD40_repeat_CS ProSitePatterns 249 263
IPR001680 WD40_rpt ProSiteProfiles 339 362
IPR001680 WD40_rpt SMART 277 314
IPR001680 WD40_rpt SMART 51 93
IPR001680 WD40_rpt SMART 151 191
IPR001680 WD40_rpt SMART 364 404
IPR001680 WD40_rpt SMART 319 360
IPR001680 WD40_rpt SMART 109 148
IPR001680 WD40_rpt SMART 222 262

No CAZYmes available for this sequence

No external refs found!