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  5. Sevir.9G140800.1

Sevir.9G140800.1


Description : glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein


Gene families : OG_01_0038861 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0038861_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G140800.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G140800.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_14
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_174


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
MF GO:0016798 hydrolase activity, acting on glycosyl bonds ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001000 GH10_dom Pfam 406 663
IPR008979 Galactose-bd-like_sf SUPERFAMILY 18 177
IPR001000 GH10_dom PRINTS 588 600
IPR001000 GH10_dom PRINTS 556 567
IPR001000 GH10_dom PRINTS 474 486
IPR001000 GH10_dom SMART 443 693
IPR001000 GH10_dom ProSiteProfiles 400 692
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 398 699
IPR044846 GH10 PANTHER 10 748
IPR003305 CenC_carb-bd Pfam 194 342
IPR003305 CenC_carb-bd Pfam 19 161
IPR008979 Galactose-bd-like_sf SUPERFAMILY 192 358
HMM Family HMM Length Query Length e-Value Query Start Query End
CBM22 131 750 1.6e-29 20 160
GH10 303 750 1.5e-69 406 689
No external refs found!