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  5. Sevir.9G155700.1

Sevir.9G155700.1


Description : expansin B2


Gene families : OG_01_0006010 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006010_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G155700.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G155700.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_2
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_127


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0019953 sexual reproduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR007118 Expan_Lol_pI PRINTS 68 86
IPR007118 Expan_Lol_pI PRINTS 220 234
IPR007118 Expan_Lol_pI PRINTS 50 65
IPR007118 Expan_Lol_pI PRINTS 162 178
IPR007118 Expan_Lol_pI PRINTS 91 109
IPR007118 Expan_Lol_pI PRINTS 259 273
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 69 179
IPR036908 RlpA-like_sf SUPERFAMILY 44 178
IPR036749 Expansin_CBD_sf SUPERFAMILY 180 273
IPR007117 Expansin_CBD ProSiteProfiles 192 273
IPR009009 RlpA-like_DPBB Pfam 88 169
IPR036908 RlpA-like_sf Gene3D 38 175
IPR007112 Expansin/allergen_DPBB_dom SMART 87 169
IPR007117 Expansin_CBD Pfam 182 262
IPR036749 Expansin_CBD_sf Gene3D 179 274
IPR005795 LolPI PRINTS 199 214
IPR005795 LolPI PRINTS 229 246
IPR005795 LolPI PRINTS 129 144
IPR005795 LolPI PRINTS 89 100
IPR005795 LolPI PRINTS 249 266
IPR005795 LolPI PRINTS 183 198
IPR005795 LolPI PRINTS 151 166

No CAZYmes available for this sequence

No external refs found!