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Description : Transducin/WD40 repeat-like superfamily protein
Gene families : OG_01_0001956 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001956_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G163300.1 | |
| Neighborhood | Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G163300.1 | |
| Cluster | Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_97 | |
| Cluster | Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_40 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR001680 | WD40_rpt | ProSiteProfiles | 254 | 285 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 94 | 457 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 352 | 381 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 433 | 455 |
| IPR045182 | JINGUBANG-like | PANTHER | 4 | 474 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 85 | 183 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 184 | 300 |
| IPR001680 | WD40_rpt | SMART | 205 | 244 |
| IPR001680 | WD40_rpt | SMART | 395 | 446 |
| IPR001680 | WD40_rpt | SMART | 298 | 337 |
| IPR001680 | WD40_rpt | SMART | 129 | 167 |
| IPR001680 | WD40_rpt | SMART | 345 | 382 |
| IPR001680 | WD40_rpt | SMART | 91 | 128 |
| IPR001680 | WD40_rpt | SMART | 247 | 286 |
| IPR001680 | WD40_rpt | Pfam | 350 | 381 |
| IPR001680 | WD40_rpt | Pfam | 215 | 243 |
| IPR001680 | WD40_rpt | Pfam | 249 | 285 |
| IPR001680 | WD40_rpt | Pfam | 399 | 445 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 301 | 484 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 433 | 447 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 273 | 287 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 231 | 245 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 212 | 253 |
No CAZYmes available for this sequence
| No external refs found! |