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  5. Sevir.9G164900.1

Sevir.9G164900.1


Description : AP2/B3-like transcriptional factor family protein


Gene families : OG_01_0011733 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011733_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G164900.1 No neighbors in network
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G164900.1
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_163


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015300 DNA-bd_pseudobarrel_sf Gene3D 428 546
IPR015300 DNA-bd_pseudobarrel_sf Gene3D 231 353
IPR044837 REM16-like PANTHER 7 212
IPR044837 REM16-like PANTHER 215 264
IPR044837 REM16-like PANTHER 264 547
IPR015300 DNA-bd_pseudobarrel_sf SUPERFAMILY 444 543
IPR003340 B3_DNA-bd ProSiteProfiles 35 128
IPR015300 DNA-bd_pseudobarrel_sf SUPERFAMILY 247 350
IPR003340 B3_DNA-bd CDD 37 126
IPR003340 B3_DNA-bd ProSiteProfiles 254 352
IPR015300 DNA-bd_pseudobarrel_sf Gene3D 27 130
IPR003340 B3_DNA-bd CDD 253 350
IPR003340 B3_DNA-bd ProSiteProfiles 488 545
IPR015300 DNA-bd_pseudobarrel_sf SUPERFAMILY 32 130
IPR003340 B3_DNA-bd SMART 450 545
IPR003340 B3_DNA-bd SMART 37 128
IPR003340 B3_DNA-bd SMART 257 352
IPR003340 B3_DNA-bd CDD 448 543
IPR003340 B3_DNA-bd Pfam 42 125
IPR003340 B3_DNA-bd Pfam 271 351
IPR003340 B3_DNA-bd Pfam 469 544

No CAZYmes available for this sequence

No external refs found!