1. Home
  2. Species
  3. Setaria viridis
  4. Sequence
  5. Sevir.9G182100.1

Sevir.9G182100.1


Description : MATE efflux family protein


Gene families : OG_01_0000125 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000125_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G182100.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G182100.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_131
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_58


Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
MF GO:0042910 xenobiotic transmembrane transporter activity ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
BP GO:1990961 xenobiotic detoxification by transmembrane export across the plasma membrane ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045069 MATE_euk CDD 59 495
IPR002528 MATE_fam Pfam 291 451
IPR002528 MATE_fam Pfam 69 229
IPR002528 MATE_fam TIGRFAM 69 466

No CAZYmes available for this sequence

No external refs found!