Sevir.9G196500.2

Description : U1 small nuclear ribonucleoprotein-70K

Gene families : OG_01_0000700 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000700_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G196500.2
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G196500.2	No neighbors in network
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_173

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0017069	snRNA binding	None	Extended
MF	GO:0030619	U1 snRNA binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000504	RRM_dom	SMART	139	212
IPR000504	RRM_dom	ProSiteProfiles	138	216
IPR022023	U1snRNP70_N	Pfam	41	129
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	125	250
IPR000504	RRM_dom	Pfam	140	209
IPR035979	RBD_domain_sf	SUPERFAMILY	125	237
IPR034143	snRNP70_RRM	CDD	137	227

No CAZYmes available for this sequence

External Links

No external refs found!