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  5. Sevir.9G204032.1

Sevir.9G204032.1


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0002363 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002363_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G204032.1 No neighbors in network
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G204032.1
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_30


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt Pfam 20 51
IPR002885 Pentatricopeptide_rpt Pfam 60 90
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 98 132
IPR011990 TPR-like_helical_dom_sf Gene3D 13 120
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 63 97
IPR002885 Pentatricopeptide_rpt Pfam 97 145
IPR002885 Pentatricopeptide_rpt TIGRFAM 136 169
IPR002885 Pentatricopeptide_rpt TIGRFAM 65 99
IPR002885 Pentatricopeptide_rpt TIGRFAM 26 54
IPR002885 Pentatricopeptide_rpt TIGRFAM 100 132
IPR011990 TPR-like_helical_dom_sf Gene3D 121 197
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 24 58
IPR002885 Pentatricopeptide_rpt Pfam 170 193
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 133 167
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 168 197

No CAZYmes available for this sequence

No external refs found!