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  5. Sevir.9G220300.1

Sevir.9G220300.1


Description : TRAF-like family protein


Gene families : OG_01_0002604 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002604_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G220300.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G220300.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_152
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_12


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002083 MATH/TRAF_dom ProSiteProfiles 185 308
IPR002083 MATH/TRAF_dom Pfam 41 144
IPR002083 MATH/TRAF_dom Pfam 200 310
IPR008974 TRAF-like Gene3D 23 164
IPR008974 TRAF-like Gene3D 172 314
IPR002083 MATH/TRAF_dom CDD 187 308
IPR002083 MATH/TRAF_dom SMART 34 140
IPR002083 MATH/TRAF_dom SMART 190 289
IPR002083 MATH/TRAF_dom ProSiteProfiles 32 159
IPR002083 MATH/TRAF_dom CDD 33 159

No CAZYmes available for this sequence

No external refs found!