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  5. Sevir.9G230900.1

Sevir.9G230900.1


Description : heat shock protein 60


Gene families : OG_01_0000308 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000308_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G230900.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G230900.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_108
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_132


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006457 protein folding ISM GOs from InterProScan
MF GO:0016887 ATP hydrolysis activity ISM GOs from InterProScan
BP GO:0042026 protein refolding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR027409 GroEL-like_apical_dom_sf SUPERFAMILY 218 409
IPR001844 Cpn60/GroEL TIGRFAM 36 561
IPR027410 TCP-1-like_intermed_sf Gene3D 170 443
IPR002423 Cpn60/GroEL/TCP-1 Pfam 56 558
IPR027409 GroEL-like_apical_dom_sf Gene3D 225 406
IPR001844 Cpn60/GroEL Hamap 35 574
IPR027413 GROEL-like_equatorial_sf SUPERFAMILY 39 555
IPR001844 Cpn60/GroEL PRINTS 301 324
IPR001844 Cpn60/GroEL PRINTS 383 408
IPR001844 Cpn60/GroEL PRINTS 60 86
IPR001844 Cpn60/GroEL PRINTS 431 452
IPR001844 Cpn60/GroEL PRINTS 116 143
IPR001844 Cpn60/GroEL CDD 37 557
IPR027410 TCP-1-like_intermed_sf SUPERFAMILY 171 238
IPR018370 Chaperonin_Cpn60_CS ProSitePatterns 438 449
IPR027413 GROEL-like_equatorial_sf Gene3D 39 556

No CAZYmes available for this sequence

No external refs found!