Sevir.1G314800.1

Description : B-box type zinc finger protein with CCT domain

Gene families : OG_01_0011524 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011524_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G314800.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G314800.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_55
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_97

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000315	Znf_B-box	SMART	16	63
IPR010402	CCT_domain	Pfam	405	447
IPR000315	Znf_B-box	Pfam	19	60
IPR000315	Znf_B-box	ProSiteProfiles	16	63
IPR010402	CCT_domain	ProSiteProfiles	405	447

No CAZYmes available for this sequence

External Links

No external refs found!