1. Home
  2. Species
  3. Setaria viridis
  4. Sequence
  5. Sevir.9G246500.1

Sevir.9G246500.1


Description : BTB-POZ and MATH domain 2


Gene families : OG_01_0000278 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000278_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G246500.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_95


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0016567 protein ubiquitination ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045005 BPM1-6 PANTHER 15 351
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 179 301
IPR002083 MATH/TRAF_dom ProSiteProfiles 27 160
IPR000210 BTB/POZ_dom ProSiteProfiles 199 264
IPR011333 SKP1/BTB/POZ_sf Gene3D 175 297
IPR000210 BTB/POZ_dom SMART 199 302
IPR002083 MATH/TRAF_dom Pfam 44 160
IPR002083 MATH/TRAF_dom CDD 29 160
IPR008974 TRAF-like Gene3D 27 164
IPR000210 BTB/POZ_dom Pfam 192 300

No CAZYmes available for this sequence

No external refs found!