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  5. Sevir.9G284500.1

Sevir.9G284500.1


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0004662 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004662_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G284500.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G284500.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_158


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000504 RRM_dom ProSiteProfiles 188 267
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 348 455
IPR000504 RRM_dom ProSiteProfiles 361 441
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 100 264
IPR000504 RRM_dom Pfam 363 427
IPR000504 RRM_dom Pfam 190 260
IPR000504 RRM_dom SMART 270 345
IPR000504 RRM_dom SMART 362 437
IPR000504 RRM_dom SMART 189 263
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 268 347
IPR000504 RRM_dom ProSiteProfiles 269 349
IPR035979 RBD_domain_sf SUPERFAMILY 352 444
IPR035979 RBD_domain_sf SUPERFAMILY 190 327

No CAZYmes available for this sequence

No external refs found!