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  5. Sevir.9G299600.1

Sevir.9G299600.1


Description : MATE efflux family protein


Gene families : OG_01_0002974 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002974_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G299600.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G299600.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_31
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_127


Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
MF GO:0042910 xenobiotic transmembrane transporter activity ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
BP GO:1990961 xenobiotic detoxification by transmembrane export across the plasma membrane ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045069 MATE_euk CDD 56 499
IPR002528 MATE_fam Pfam 66 227
IPR002528 MATE_fam Pfam 303 458
IPR002528 MATE_fam TIGRFAM 66 472

No CAZYmes available for this sequence

No external refs found!