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  5. Sevir.9G311900.1

Sevir.9G311900.1


Description : phosphorylcholine cytidylyltransferase2


Gene families : OG_01_0011117 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011117_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G311900.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G311900.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_307
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_61


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004105 choline-phosphate cytidylyltransferase activity ISM GOs from InterProScan
BP GO:0006657 CDP-choline pathway ISM GOs from InterProScan
BP GO:0009058 biosynthetic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR004821 Cyt_trans-like TIGRFAM 49 116
IPR041723 CCT CDD 46 197
IPR045049 Pcy1-like PANTHER 16 300
IPR014729 Rossmann-like_a/b/a_fold Gene3D 13 264
IPR004821 Cyt_trans-like Pfam 51 180

No CAZYmes available for this sequence

No external refs found!