Sevir.9G318800.1

Description : BAH domain ;TFIIS helical bundle-like domain

Gene families : OG_01_0004975 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004975_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G318800.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G318800.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_92
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_102

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003682	chromatin binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	GOs from InterProScan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR017923	TFIIS_N	Pfam	390	439
IPR001025	BAH_dom	SMART	85	199
IPR001025	BAH_dom	ProSiteProfiles	85	199
IPR017923	TFIIS_N	ProSiteProfiles	359	442
IPR003617	TFIIS/CRSP70_N_sub	SMART	365	441
IPR035441	TFIIS/LEDGF_dom_sf	Gene3D	308	443
IPR043151	BAH_sf	Gene3D	78	293
IPR035441	TFIIS/LEDGF_dom_sf	SUPERFAMILY	348	449

No CAZYmes available for this sequence

External Links

No external refs found!