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Description : expansin B2
Gene families : OG_01_0000116 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000116_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G332000.1 | |
| Neighborhood | Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G332000.1 | |
| Cluster | Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_209 | |
| Cluster | Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_327 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005576 | extracellular region | ISM | GOs from InterProScan |
| BP | GO:0019953 | sexual reproduction | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR036908 | RlpA-like_sf | Gene3D | 40 | 178 |
| IPR036749 | Expansin_CBD_sf | SUPERFAMILY | 183 | 282 |
| IPR036908 | RlpA-like_sf | SUPERFAMILY | 49 | 181 |
| IPR007117 | Expansin_CBD | Pfam | 184 | 271 |
| IPR007112 | Expansin/allergen_DPBB_dom | SMART | 93 | 172 |
| IPR007117 | Expansin_CBD | ProSiteProfiles | 195 | 282 |
| IPR007112 | Expansin/allergen_DPBB_dom | ProSiteProfiles | 76 | 182 |
| IPR036749 | Expansin_CBD_sf | Gene3D | 181 | 285 |
| IPR005795 | LolPI | PRINTS | 132 | 147 |
| IPR005795 | LolPI | PRINTS | 238 | 255 |
| IPR005795 | LolPI | PRINTS | 258 | 275 |
| IPR005795 | LolPI | PRINTS | 95 | 106 |
| IPR005795 | LolPI | PRINTS | 186 | 201 |
| IPR005795 | LolPI | PRINTS | 202 | 217 |
| IPR005795 | LolPI | PRINTS | 154 | 169 |
| IPR005795 | LolPI | PRINTS | 115 | 125 |
| IPR007118 | Expan_Lol_pI | PRINTS | 55 | 70 |
| IPR007118 | Expan_Lol_pI | PRINTS | 165 | 181 |
| IPR007118 | Expan_Lol_pI | PRINTS | 75 | 93 |
| IPR007118 | Expan_Lol_pI | PRINTS | 229 | 243 |
| IPR007118 | Expan_Lol_pI | PRINTS | 268 | 282 |
| IPR007118 | Expan_Lol_pI | PRINTS | 97 | 115 |
| IPR009009 | RlpA-like_DPBB | Pfam | 94 | 171 |
No CAZYmes available for this sequence
| No external refs found! |